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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
877
total RNA-seq
74
single cell RNA-seq
5
small RNA-seq
Assay category
956
Transcription
371
DNA binding
207
DNA accessibility
60
DNA methylation
10
3D chromatin structure
Date released
475
February, 2021
157
July, 2018
89
August, 2017
46
February, 2023
42
May, 2021
39
April, 2018
26
September, 2018
20
July, 2019
20
November, 2019
16
September, 2020
6
May, 2022
5
March, 2020
4
November, 2020
3
August, 2018
3
February, 2020
2
October, 2018
1
August, 2021
1
June, 2018
1
May, 2023
Available data
882
bam
880
tsv
876
bigWig
253
fastq
6
txt
Organism
956
Homo sapiens
Biosample type
748
tissue
166
primary cell
33
cell line
9
in vitro differentiated cells
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
894
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
877
GRCh38
877
hg19
Lab
890
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
40
inconsistent ontology term
BIOSAMPLE
ASSAY
956 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
284
bone tissue
58
subcutaneous adipose tissue
7
1
omental fat pad
5
1
+ See 3 more…
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 10 more…
cell line
EndoC_BH1
33
in vitro differentiated cells
adipocyte
5
immature adipocyte
2
cardiac fibroblast
1
preadipocyte
1
See all biosamples
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