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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
4
DNase-seq
ATAC-seq
2
total RNA-seq
1
FAIRE-seq
1
Hi-C
Assay category
24
DNA binding
5
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
193
May, 2021
95
May, 2022
76
February, 2023
59
September, 2018
56
August, 2017
56
September, 2020
55
June, 2019
48
July, 2018
47
February, 2021
47
May, 2020
43
April, 2018
32
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
5
December, 2019
5
May, 2019
5
November, 2020
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
29
bam
23
bigWig
19
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
32
Homo sapiens
Biosample type
226
tissue
32
primary cell
30
cell line
4
in vitro differentiated cells
Organ
32
epithelium
21
blood vessel
21
vasculature
21
vein
11
kidney
Project
32
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
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