Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
pCHi-C
2
ChIP-seq
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
GRO-seq
Assay category
2
DNA binding
1
Transcription
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
narrow histone mark
Date released
4
March, 2020
2
December, 2017
1
January, 2018
1
March, 2023
Available data
4
tsv
3
fastq
2
bam
2
bed bed3+
2
bigWig
1
bed narrowPeak
Organism
7
Homo sapiens
Biosample type
2453
tissue
970
primary cell
642
cell line
339
in vitro differentiated cells
8
stem cell
Organ
1
connective tissue
Project
7
AMP
1
community
Genome assembly (visualization)
2
GRCh38
2
hg19
1
hg18
Lab
7
AMP-T2D consortium
1
Anna Gloyn, Oxford
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
CRISPR RNA-seq
month_released!
October, 2022
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
8 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
ChIP-seq
CRISPRi RNA-seq
GRO-seq
stem cell
hESC
2
1
SB Ad3.1
1
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
Download