Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
ATAC-seq
34
ChIP-seq
4
DNase-seq
Assay category
56
Transcription
34
DNA binding
4
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
25
October, 2019
5
May, 2019
2
February, 2020
2
July, 2019
2
June, 2019
Available data
92
bam
83
bigWig
56
tsv
29
bed narrowPeak
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
94
Homo sapiens
Biosample type
58
cell line
34
tissue
2
primary cell
Organ
732
liver
716
pancreas
652
connective tissue
484
adipose tissue
345
epithelium
279
brain
253
heart
184
vasculature
178
blood vessel
157
kidney
147
bone element
114
limb
94
artery
94
musculature of body
68
blood
68
bodily fluid
42
nerve
33
eye
29
embryo
24
spleen
22
vein
18
ureter
11
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
94
AMP
Genome assembly (visualization)
83
GRCh38
83
hg19
Lab
94
AMP-T2D consortium
assay_title!
ATAC-seq
single cell RNA-seq
month_released!
August, 2021
BIOSAMPLE
ASSAY
94 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
2
coronary artery
1
5
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download