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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
20
DNA binding
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
764
liver
714
pancreas
652
connective tissue
483
adipose tissue
345
epithelium
277
brain
245
heart
211
kidney
182
vasculature
177
blood vessel
147
bone element
113
limb
94
artery
90
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
32
eye
22
spleen
22
vein
18
ureter
11
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
22
AMP-T2D consortium
assay_title!
ATAC-seq
single cell RNA-seq
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
pCHi-C
tissue
spleen
20
1
1
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