Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
64
ChIP-seq
Assay category
190
Transcription
64
DNA binding
Target of assay
49
histone
49
histone modification
30
narrow histone mark
19
broad histone mark
15
transcription factor
11
RNA binding protein
Date released
550
February, 2021
280
November, 2017
263
May, 2021
244
August, 2017
210
June, 2019
207
May, 2020
201
October, 2019
164
July, 2018
96
May, 2019
79
November, 2018
77
December, 2017
73
July, 2019
64
April, 2019
58
September, 2018
49
April, 2018
47
October, 2018
40
May, 2024
31
August, 2021
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
16
March, 2020
6
October, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
2
September, 2017
1
March, 2023
1
May, 2023
Available data
254
bam
254
bigWig
190
tsv
64
bed narrowPeak
45
bigBed narrowPeak
33
fastq
19
tagAlign
Organism
254
Homo sapiens
Biosample type
207
tissue
47
primary cell
Organ
162
liver
42
pancreas
5
adipose tissue
5
connective tissue
2
epithelium
Project
209
AMP
45
T1D
Genome assembly (visualization)
262
hg19
254
GRCh38
Lab
209
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
254 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
tissue
liver
143
19
body of pancreas
25
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
+ See 1 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 21 more…
See all biosamples
Download