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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
Assay category
81
DNA binding
Target of assay
52
histone
52
histone modification
29
transcription factor
28
narrow histone mark
24
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
34
August, 2017
32
September, 2018
10
November, 2017
3
October, 2017
2
November, 2018
Available data
83
fastq
82
bam
81
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
81
Homo sapiens
Biosample type
44
primary cell
25
tissue
12
cell line
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
12
adipose tissue
12
connective tissue
12
liver
3
brain
Project
81
AMP
Genome assembly (visualization)
81
hg19
74
GRCh38
Lab
81
AMP-T2D consortium
Audit category:
81
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
assay_title!
ATAC-seq
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
3
cell line
HepG2
12
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