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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
53
histone
53
histone modification
30
transcription factor
28
narrow histone mark
25
broad histone mark
6
chromatin remodeller
RNA binding protein
1
recombinant protein
Date released
33
August, 2017
32
September, 2018
8
November, 2017
4
October, 2017
3
November, 2018
Available data
80
fastq
79
bam
78
bigWig
46
bed narrowPeak
13
bed bed3+
13
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
80
Homo sapiens
Biosample type
44
primary cell
25
tissue
11
cell line
in vitro differentiated cells
Organ
53
pancreas
21
epithelium
12
adipose tissue
12
connective tissue
11
liver
4
brain
Project
80
AMP
Genome assembly (visualization)
78
hg19
72
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
80
missing controlled_by
Audit category:
4
inconsistent control run_type
3
inconsistent control read length
assay_title!
ATAC-seq
biosample_type!
in vitro differentiated cells
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
9
brain
4
cell line
HepG2
11
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