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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
28
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
28
DNA binding
4
DNA accessibility
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
25
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
32
bam
25
bed narrowPeak
25
bigBed narrowPeak
25
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
36
Homo sapiens
Biosample type
58
cell line
36
tissue
2
primary cell
Organ
541
connective tissue
482
adipose tissue
443
pancreas
340
liver
261
brain
234
heart
224
kidney
146
bone element
114
limb
95
blood vessel
95
vasculature
81
musculature of body
42
nerve
36
artery
28
eye
24
spleen
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
36
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
36
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
tibial artery
23
2
1
coronary artery
5
2
1
pulmonary artery
2
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