Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
18
DNA binding
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
21
October, 2019
5
July, 2019
3
February, 2020
1
May, 2019
Available data
106
bam
89
bigWig
84
bed narrowPeak
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
725
pancreas
635
connective tissue
477
adipose tissue
411
liver
367
epithelium
212
heart
175
kidney
155
brain
147
bone element
107
vasculature
105
blood vessel
71
artery
48
musculature of body
37
embryo
30
limb
27
eye
20
lung
16
nerve
14
blood
14
bodily fluid
11
spleen
9
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
30
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
30 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
5
tibial artery
5
1
gastrocnemius medialis
1
4
muscle of leg
1
1
islet of Langerhans
1
Download