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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
ATAC-seq
13
single cell RNA-seq
8
ChIP-seq
2
pCHi-C
Assay category
27
DNA accessibility
13
Transcription
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
317
August, 2017
276
October, 2019
218
June, 2019
192
May, 2021
134
February, 2021
123
May, 2022
120
August, 2021
120
May, 2019
98
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
56
September, 2020
52
May, 2020
47
September, 2023
37
July, 2019
35
December, 2018
33
September, 2018
25
January, 2019
24
February, 2018
19
April, 2020
17
March, 2020
16
January, 2021
15
November, 2019
15
October, 2017
11
November, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
July, 2018
4
May, 2023
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
1
March, 2019
Available data
tsv
554
bam
550
bigWig
89
txt
45
fastq
8
tagAlign
6
csv
5
bed narrowPeak
2
bed bed3+
Organism
134
Homo sapiens
Biosample type
85
tissue
40
primary cell
9
cell line
Organ
84
bone element
6
artery
6
blood vessel
6
heart
6
vasculature
2
liver
1
connective tissue
Project
95
AMP
39
HPAP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
95
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
assay_title!
ATAC-seq
files.file_type!
tsv
BIOSAMPLE
ASSAY
134 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
ChIP-seq
pCHi-C
tissue
bone element
84
liver
1
primary cell
Langerhans cell
27
12
osteoblast
1
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
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