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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
ATAC-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
36
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
63
October, 2019
32
June, 2019
7
May, 2019
5
July, 2019
Available data
106
bam
89
bigWig
84
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
107
Homo sapiens
Biosample type
107
tissue
Organ
594
liver
379
pancreas
266
epithelium
256
brain
255
kidney
181
connective tissue
138
heart
122
vasculature
116
blood vessel
107
limb
89
bone element
86
musculature of body
84
adipose tissue
68
blood
68
bodily fluid
38
artery
37
nerve
28
eye
23
embryo
23
spleen
22
vein
19
lung
18
ureter
4
gonad
4
ovary
4
skeleton
1
bone marrow
1
lymph node
1
pericardium
1
pituitary gland
1
thymus
Project
107
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
107
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ATAC-seq
files.file_type!
tsv
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
DNase-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
tibial artery
23
2
muscle of leg
7
13
1
muscle of arm
17
gastrocnemius medialis
4
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