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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
25
ChIP-seq
4
DNase-seq
ATAC-seq
Assay category
54
Transcription
25
DNA binding
4
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
20
October, 2019
3
May, 2019
2
July, 2019
2
June, 2019
Available data
92
bam
83
bigWig
58
tsv
29
bed narrowPeak
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
83
Homo sapiens
Biosample type
56
cell line
25
tissue
2
primary cell
Organ
601
liver
582
pancreas
561
connective tissue
421
adipose tissue
267
epithelium
220
brain
180
heart
152
vasculature
147
blood vessel
131
kidney
89
limb
83
artery
67
musculature of body
58
bone element
54
blood
54
bodily fluid
30
nerve
29
embryo
18
ureter
15
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
83
AMP
Genome assembly (visualization)
83
GRCh38
83
hg19
Lab
83
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
83 results
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total RNA-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
18
2
coronary artery
3
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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