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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
ATAC-seq
50
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
238
bam
215
bigWig
189
tsv
50
tagAlign
27
bed narrowPeak
Organism
241
Homo sapiens
Biosample type
193
tissue
47
primary cell
1
cell line
Organ
194
liver
Project
196
AMP
45
T1D
Genome assembly (visualization)
215
hg19
207
GRCh38
Lab
196
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_title!
ATAC-seq
month_released!
September, 2020
BIOSAMPLE
ASSAY
241 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
cell line
HepG2
1
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