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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
2
Hi-C
1
pCHi-C
1
total RNA-seq
Assay category
50
DNA binding
2
3D chromatin structure
1
Transcription
Target of assay
36
histone
36
histone modification
22
broad histone mark
14
narrow histone mark
11
control
3
RNA binding protein
3
transcription factor
Date released
58
February, 2021
50
May, 2019
46
October, 2019
10
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
51
bam
40
bigWig
39
bed narrowPeak
39
bigBed narrowPeak
2
bedpe bed3+
2
hic
2
tsv
Organism
54
Homo sapiens
Biosample type
53
tissue
1
primary cell
Organ
54
blood vessel
54
vasculature
30
brain
28
heart
12
musculature of body
12
pancreas
9
epithelium
7
kidney
7
limb
5
artery
3
liver
2
connective tissue
2
intestine
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
54
AMP
Genome assembly (visualization)
42
hg19
40
GRCh38
Lab
54
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
Hi-C
pCHi-C
total RNA-seq
tissue
aorta
13
1
1
1
ascending aorta
16
thoracic aorta
16
coronary artery
5
primary cell
endothelial cell of umbilical vein
1
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