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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
total RNA-seq
ATAC-seq
50
ChIP-seq
1
pCHi-C
Assay category
186
Transcription
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
565
February, 2021
406
August, 2017
406
November, 2017
291
May, 2021
273
October, 2019
240
August, 2021
237
May, 2020
192
June, 2019
162
July, 2018
123
May, 2022
117
May, 2019
100
February, 2023
100
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
45
March, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
20
November, 2019
19
April, 2020
16
January, 2021
15
October, 2017
9
November, 2020
8
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
2
June, 2018
1
August, 2022
1
March, 2019
Available data
234
bam
211
bigWig
185
tsv
50
tagAlign
27
bed narrowPeak
Organism
237
Homo sapiens
Biosample type
193
tissue
43
primary cell
1
cell line
Organ
194
liver
Project
196
AMP
41
T1D
Genome assembly (visualization)
211
hg19
203
GRCh38
Lab
196
AMP-T2D consortium
41
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assay_title!
ATAC-seq
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
237 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 20 more…
cell line
HepG2
1
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