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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
4
DNase-seq
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
40
DNA binding
5
DNA accessibility
1
3D chromatin structure
Target of assay
33
histone
33
histone modification
23
broad histone mark
10
narrow histone mark
7
control
Date released
58
February, 2021
50
May, 2019
46
October, 2019
9
July, 2019
6
August, 2021
5
June, 2019
4
March, 2020
3
February, 2020
3
November, 2017
Available data
45
bam
35
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
1
hic
1
tar
Organism
46
Homo sapiens
Biosample type
25
tissue
21
primary cell
Organ
85
brain
67
limb
46
blood vessel
46
vasculature
41
nerve
34
epithelium
30
kidney
25
artery
21
vein
20
eye
15
pancreas
8
heart
6
liver
4
gonad
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
Project
46
AMP
Genome assembly (visualization)
36
hg19
32
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
DNase-seq
FAIRE-seq
Hi-C
tissue
tibial artery
23
2
primary cell
endothelial cell of umbilical vein
17
2
1
1
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