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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1652
ChIP-seq
1130
total RNA-seq
ATAC-seq
289
single cell RNA-seq
204
DNase-seq
87
RNA microarray
73
snATAC-seq
56
pCHi-C
25
Hi-C
24
WGBS
19
RRBS
16
small RNA-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
16
Transcription
Date released
16
July, 2019
Available data
16
bam
16
bigWig
16
tsv
Organism
16
Homo sapiens
Biosample type
14
tissue
2
primary cell
Organ
4
brain
3
adipose tissue
3
connective tissue
3
liver
2
musculature of body
pancreas
1
heart
1
kidney
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
assay_title!
ATAC-seq
organ_slims!
pancreas
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
16 results
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small RNA-seq
tissue
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
heart
1
+ See 8 more…
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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