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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
171
ChIP-seq
98
total RNA-seq
ATAC-seq
Assay category
171
DNA binding
98
Transcription
Target of assay
152
histone
152
histone modification
85
broad histone mark
67
narrow histone mark
16
transcription factor
6
RNA binding protein
3
control
Date released
170
May, 2021
45
May, 2020
40
May, 2024
14
August, 2021
Available data
269
bigWig
186
bam
168
bed narrowPeak
165
fastq
114
zippedFastqFolder
112
tsv
84
tagAlign
63
txt
7
hic
5
bedpe bed3+
4
bed bed3+
3
cool
1
bedpe
1
vcf
Organism
269
Homo sapiens
Biosample type
215
primary cell
40
tissue
14
cell line
Organ
40
heart
14
liver
Project
180
T1D
89
AMP
Genome assembly (visualization)
229
hg19
220
GRCh38
Lab
AMP-T2D consortium
215
Kyle Gaulton, UCSD
40
Patrick T. Ellinor, Broad
14
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
assay_title!
ATAC-seq
organ_slims!
pituitary gland
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
269 results
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ChIP-seq
total RNA-seq
primary cell
monocyte
84
53
CD8-positive, alpha-beta T cell
33
4
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
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tissue
left cardiac atrium
40
cell line
HepG2
14
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