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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
DNase-seq
ATAC-seq
Assay category
18
DNA binding
2
DNA accessibility
Target of assay
10
histone
10
histone modification
6
broad histone mark
5
control
4
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
9
November, 2017
9
October, 2017
2
November, 2018
Available data
240
bam
219
bigWig
202
bed narrowPeak
127
bigBed narrowPeak
117
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
20
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
tagAlign bed3+
Organism
20
Homo sapiens
Biosample type
11
tissue
9
primary cell
Organ
464
liver
415
pancreas
225
epithelium
99
connective tissue
60
blood
60
bodily fluid
42
adipose tissue
27
embryo
23
spleen
20
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
20
AMP
Genome assembly (visualization)
17
hg19
14
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
4
missing controlled_by
assay_title!
ATAC-seq
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
DNase-seq
tissue
brain
9
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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