Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
ATAC-seq
29
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
29
DNA binding
4
DNA accessibility
Target of assay
18
histone
18
histone modification
14
broad histone mark
7
control
4
narrow histone mark
4
transcription factor
Date released
58
February, 2021
25
October, 2019
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
2
June, 2019
Available data
87
bam
80
bigWig
58
tsv
26
bed narrowPeak
22
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
91
Homo sapiens
Biosample type
58
cell line
31
tissue
2
primary cell
Organ
792
pancreas
768
liver
659
connective tissue
485
adipose tissue
416
epithelium
285
heart
274
kidney
254
brain
147
bone element
140
vasculature
134
blood vessel
107
limb
91
artery
88
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
91
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
91
AMP-T2D consortium
assay_title!
ATAC-seq
month_released!
May, 2019
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
2
coronary artery
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download