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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
8
snATAC-seq
ATAC-seq
Assay category
51
DNA binding
8
DNA accessibility
Target of assay
51
transcription factor
RNA binding protein
10
chromatin remodeller
6
control
2
histone
2
histone modification
2
narrow histone mark
Date released
25
December, 2018
13
November, 2018
12
January, 2019
8
January, 2021
1
October, 2019
Available data
50
bam
50
fastq
44
bed narrowPeak
44
bigBed narrowPeak
44
bigWig
Organism
59
Homo sapiens
Biosample type
50
cell line
8
primary cell
1
tissue
Organ
785
pancreas
710
liver
649
connective tissue
480
adipose tissue
413
epithelium
335
heart
279
brain
276
kidney
185
vasculature
180
blood vessel
147
bone element
114
limb
95
artery
95
musculature of body
58
blood
58
bodily fluid
42
nerve
37
embryo
32
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
spinal cord
1
stomach
1
urinary bladder
Project
51
AMP
8
T1D
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
51
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
ATAC-seq
organ_slims!
spinal cord
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
snATAC-seq
cell line
GM12878
50
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
1
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