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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
6
WGBS
ATAC-seq
1
DNase-seq
Assay category
117
DNA binding
6
DNA methylation
1
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
34
transcription factor
28
narrow histone mark
14
control
4
RNA binding protein
2
chromatin remodeller
Date released
450
February, 2021
124
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
5
November, 2020
4
February, 2023
3
August, 2021
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
May, 2023
1
November, 2018
1
October, 2019
Available data
71
fastq
70
bam
64
bigWig
45
bed narrowPeak
22
tagAlign
11
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed narrowPeak
1
bigBed broadPeak
Organism
124
Homo sapiens
Biosample type
68
in vitro differentiated cells
56
tissue
Organ
185
pancreas
124
connective tissue
56
adipose tissue
53
liver
26
epithelium
26
musculature of body
Project
124
AMP
Genome assembly (visualization)
64
GRCh38
63
hg19
Lab
124
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
124 results
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ChIP-seq
WGBS
DNase-seq
in vitro differentiated cells
adipocyte
67
1
tissue
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
adipose tissue
2
3
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