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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
20
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
Available data
7
bam
6
bed narrowPeak
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
27
Homo sapiens
Biosample type
25
tissue
2
primary cell
Organ
725
pancreas
635
connective tissue
477
adipose tissue
411
liver
367
epithelium
212
heart
175
kidney
155
brain
147
bone element
107
vasculature
105
blood vessel
71
artery
48
musculature of body
37
embryo
30
limb
27
eye
20
lung
16
nerve
14
blood
14
bodily fluid
11
spleen
9
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
1
hg19
Lab
27
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
27 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
2
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
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