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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
4
DNase-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
19
Transcription
4
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
18
October, 2019
6
June, 2019
4
February, 2023
1
February, 2020
1
July, 2019
Available data
6
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
26
tissue
4
primary cell
Organ
666
liver
643
pancreas
581
connective tissue
453
adipose tissue
328
epithelium
249
kidney
244
heart
147
bone element
119
vasculature
114
blood vessel
95
brain
76
artery
67
blood
67
bodily fluid
65
limb
62
musculature of body
30
eye
25
embryo
20
lung
18
nerve
18
spleen
18
ureter
7
vein
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
30
AMP-T2D consortium
assay_title!
ATAC-seq
target.investigated_as!
histone
BIOSAMPLE
ASSAY
30 results
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Clear Filters
total RNA-seq
DNase-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
retina
3
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
2
1
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