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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
ATAC-seq
1
pCHi-C
Assay category
20
DNA binding
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
1
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
705
liver
661
pancreas
649
connective tissue
483
adipose tissue
316
heart
292
epithelium
244
brain
173
vasculature
171
blood vessel
154
kidney
146
bone element
92
artery
78
limb
62
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
18
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
14
GRCh38
12
hg19
Lab
23
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
WGBS
pCHi-C
tissue
spleen
20
2
1
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