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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
199
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
90
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
3
November, 2018
Available data
77
bam
77
bigWig
76
bed narrowPeak
75
bigBed narrowPeak
67
tagAlign
24
bed broadPeak
20
fastq
18
bigBed broadPeak
Organism
90
Homo sapiens
Biosample type
70
tissue
17
cell line
3
primary cell
Organ
73
brain
17
liver
2
epithelium
2
vasculature
1
blood vessel
Project
90
AMP
Genome assembly (visualization)
75
GRCh38
26
hg19
Lab
90
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
+ See 1 more…
cell line
HepG2
17
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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