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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
22
total RNA-seq
12
ATAC-seq
2
Capture-C
Assay category
45
DNA binding
22
Transcription
12
DNA accessibility
Target of assay
30
histone
30
histone modification
15
broad histone mark
15
control
15
narrow histone mark
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
76
bam
53
bigWig
41
bed narrowPeak
39
fastq
22
tsv
20
tagAlign
2
bed bed3+
Organism
81
Homo sapiens
Biosample type
229
tissue
81
in vitro differentiated cells
44
cell line
4
primary cell
Organ
13
embryo
4
connective tissue
Project
81
AMP
Genome assembly (visualization)
64
hg19
61
GRCh38
Lab
77
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent control read length
assay_title!
CRISPR RNA-seq
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
in vitro differentiated cells
neural progenitor cell
21
7
10
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
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