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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
449
transcription factor
157
histone modification
156
histone
152
control
85
broad histone mark
84
RNA binding protein
82
recombinant protein
70
narrow histone mark
35
chromatin remodeller
5
other context
5
other post-translational modification
Date released
33
August, 2017
15
December, 2017
11
October, 2018
8
February, 2018
8
November, 2017
6
October, 2017
4
January, 2019
Available data
309
bigWig
308
bed narrowPeak
278
bam
221
bigBed narrowPeak
96
tagAlign
85
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
81
Homo sapiens
Biosample type
45
tissue
primary cell
31
in vitro differentiated cells
8
cell line
1
stem cell
Organ
25
liver
25
pancreas
12
connective tissue
7
epithelium
6
brain
4
embryo
4
spleen
Project
85
AMP
Genome assembly (visualization)
84
hg19
83
GRCh38
Lab
85
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
15
inconsistent control read length
1
inconsistent assembly
assay_title!
CRISPR RNA-seq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
11
pancreas
8
liver
7
brain
6
islet of Langerhans
6
+ See 2 more…
in vitro differentiated cells
adipocyte
12
hepatocyte
7
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
+ See 4 more…
cell line
HepG2
8
stem cell
hESC
1
See all biosamples
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