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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ATAC-seq
52
single cell RNA-seq
WGBS
21
snATAC-seq
Assay category
124
DNA accessibility
52
Transcription
Date released
93
May, 2022
64
August, 2021
19
September, 2020
Available data
3374
bam
3152
bigWig
1817
bed narrowPeak
1594
tsv
1341
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
112
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
176
Homo sapiens
Biosample type
112
primary cell
64
tissue
Organ
64
kidney
39
epithelium
39
pancreas
Project
112
HPAP
64
AMP
Genome assembly (visualization)
64
GRCh38
Lab
112
Klaus Kaestner, Upenn
64
Katalin Susztak, Upenn
assay_title!
CRISPR RNA-seq
WGBS
BIOSAMPLE
ASSAY
176 results
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ATAC-seq
single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
kidney
64
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