Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
ChIP-seq
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snATAC-seq
Assay category
3
Transcription
1
DNA accessibility
1
DNA binding
Target of assay
6
histone
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
3
March, 2023
1
April, 2020
1
August, 2017
1
August, 2021
1
February, 2023
1
October, 2022
Available data
1
bam
1
fastq
1
tagAlign
1
txt
Organism
Homo sapiens
Biosample type
4
cell line
3
tissue
1
stem cell
Organ
2
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
1
lung
Project
4
AMP
3
community
1
LungMap
Lab
4
AMP-T2D consortium
3
Anna Gloyn, Oxford
1
Xin Sun, UCSD
assay_title!
CRISPR RNA-seq
month_released!
November, 2019
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
8 results
search-icon
table-tab-icon
Clear Filters
CRISPR genome editing followed by sgRNA sequencing
CRISPRi RNA-seq
ChIP-seq
MPRA
RNA microarray
shRNA RNA-seq
siRNA RNA-seq
snATAC-seq
cell line
EndoC-BH1
1
1
EndoC_BH1
1
MIN6
1
tissue
lung
1
pancreas
1
subcutaneous adipose tissue
1
stem cell
SB Ad3.1
1
Download