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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
238
ChIP-seq
15
total RNA-seq
Assay category
238
DNA binding
15
Transcription
Target of assay
139
histone
139
histone modification
81
broad histone mark
58
narrow histone mark
52
control
47
transcription factor
9
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
4
August, 2018
4
March, 2023
4
October, 2022
3
June, 2018
1
August, 2022
Available data
253
bam
200
bigWig
185
bed narrowPeak
147
bigBed narrowPeak
133
fastq
15
bed bed3+
15
tsv
Organism
253
Homo sapiens
Biosample type
163
tissue
82
in vitro differentiated cells
5
primary cell
3
stem cell
Organ
63
liver
50
blood vessel
50
vasculature
28
brain
26
embryo
24
epithelium
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
253
AMP
Genome assembly (visualization)
205
hg19
204
GRCh38
Lab
253
AMP-T2D consortium
Audit category:
27
inconsistent control
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
13
inconsistent control read length
assay_title!
CRISPR RNA-seq
BIOSAMPLE
ASSAY
253 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
in vitro differentiated cells
pancreatic endoderm
18
4
hepatocyte
15
definitive endodermal cell
8
2
primitive gut cell
8
2
Posterior foregut
5
+ See 5 more…
primary cell
kidney epithelial cell
5
stem cell
hESC
3
See all biosamples
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