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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
4
RRBS
Assay category
163
DNA accessibility
125
Transcription
52
DNA binding
4
DNA methylation
1
3D chromatin structure
Target of assay
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
12
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
23
April, 2019
21
October, 2019
5
May, 2019
4
July, 2019
3
June, 2019
Available data
52
bam
39
bed narrowPeak
39
bigWig
24
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
28
tissue
18
primary cell
10
cell line
Organ
559
liver
271
pancreas
220
brain
182
epithelium
160
connective tissue
144
heart
105
vasculature
101
blood vessel
79
adipose tissue
67
limb
60
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
56
AMP
Genome assembly (visualization)
43
hg19
39
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
RRBS
tissue
kidney
27
1
primary cell
epithelial cell of proximal tubule
10
1
kidney epithelial cell
5
1
renal cortical epithelial cell
1
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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