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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
9
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
43
DNA accessibility
9
DNA binding
4
Transcription
Target of assay
9
control
Date released
35
February, 2023
10
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
Available data
102
bam
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
56
Homo sapiens
Biosample type
46
tissue
10
cell line
Organ
272
pancreas
223
epithelium
223
kidney
169
heart
169
liver
113
connective tissue
100
bone element
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
12
nerve
9
spleen
8
embryo
7
vein
6
blood
6
bodily fluid
5
gonad
5
ovary
2
intestine
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
56
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
56
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by DNA sequencing
files.file_type!
bigWig
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
8
2
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