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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ATAC-seq
1
snATAC-seq
Assay category
72
Transcription
16
DNA accessibility
Date released
13
February, 2023
2
February, 2021
1
May, 2022
Available data
492
bed narrowPeak
389
bam
350
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
16
Homo sapiens
Biosample type
8
in vitro differentiated cells
6
tissue
1
cell line
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
1
musculature of body
Project
16
AMP
Genome assembly (visualization)
16
hg19
2
GRCh38
Lab
13
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
audit script error
1
inconsistent ontology term
1
inconsistent replicate
assay_title!
CRISPR genome editing followed by DNA sequencing
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
snATAC-seq
in vitro differentiated cells
chondrocyte
5
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
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cell line
HepG2
1
primary cell
osteoblast
1
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