Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
4
Hi-C
Assay category
11
DNA accessibility
4
3D chromatin structure
Date released
7
June, 2019
4
October, 2019
2
July, 2019
2
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
15
Homo sapiens
Biosample type
9
primary cell
6
tissue
Organ
78
kidney
36
limb
36
musculature of body
36
pancreas
35
brain
33
heart
28
connective tissue
26
epithelium
18
ureter
15
liver
15
vasculature
13
blood vessel
7
adipose tissue
4
artery
4
eye
3
embryo
3
vein
2
nerve
1
spleen
Project
15
AMP
Genome assembly (visualization)
14
hg19
11
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 1 more…
tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
See all biosamples
Download