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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
8
DNase-seq
ATAC-seq
1
FAIRE-seq
Assay category
58
DNA binding
9
DNA accessibility
Target of assay
58
histone
58
histone modification
38
broad histone mark
20
narrow histone mark
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
67
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
37
August, 2017
30
December, 2018
21
January, 2019
6
October, 2017
2
July, 2019
1
November, 2020
Available data
244
bam
202
bigWig
183
bed narrowPeak
67
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
67
Homo sapiens
Biosample type
46
tissue
13
primary cell
8
cell line
Organ
46
limb
33
blood vessel
33
vasculature
26
nerve
20
artery
14
epithelium
13
vein
7
pancreas
1
kidney
Project
67
AMP
Genome assembly (visualization)
67
hg19
66
GRCh38
Lab
67
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by DNA sequencing
ATAC-seq
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
primary cell
endothelial cell of umbilical vein
10
2
1
cell line
Panc1
6
1
glomerular visceral epithelial cell
1
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