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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
12
DNA accessibility
Target of assay
58
histone
histone modification
38
broad histone mark
20
narrow histone mark
Date released
239
November, 2017
191
June, 2019
73
November, 2018
33
December, 2017
30
December, 2018
15
October, 2018
14
January, 2019
14
September, 2018
12
August, 2017
12
October, 2019
5
April, 2019
5
May, 2019
5
September, 2017
2
July, 2019
1
November, 2020
Available data
77
bam
38
bigWig
22
bed narrowPeak
16
tsv
12
bigBed narrowPeak
9
tagAlign
8
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
4
hic
3
bedpe bed3+
1
hdf5
1
tar
Organism
12
Homo sapiens
Biosample type
5
tissue
3
primary cell
2
cell line
2
in vitro differentiated cells
Organ
5
blood vessel
5
vasculature
4
epithelium
4
limb
3
connective tissue
3
vein
2
artery
2
nerve
1
adipose tissue
1
kidney
1
pancreas
Project
12
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by DNA sequencing
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
12 results
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DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial artery
2
tibial nerve
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
2
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