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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
10
DNA binding
2
Transcription
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
10
June, 2019
3
July, 2019
Available data
13
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
49
tissue
13
primary cell
Organ
385
epithelium
346
pancreas
31
connective tissue
29
vasculature
26
kidney
25
blood vessel
20
vein
13
brain
13
musculature of body
10
heart
8
blood
8
bodily fluid
8
liver
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
13
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
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