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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
Assay category
7
3D chromatin structure
Date released
3
October, 2022
2
November, 2019
1
March, 2019
1
March, 2020
Available data
622
bam
554
bigWig
423
fastq
417
tsv
155
bed narrowPeak
80
zippedFastqFolder
72
bigBed narrowPeak
23
bed bed3+
17
bed broadPeak
12
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
7
Homo sapiens
Biosample type
3
primary cell
3
tissue
1
cell line
Organ
7
pancreas
6
epithelium
3
blood vessel
3
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
4
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
3
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
7 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
2
pancreas
1
cell line
EndoC_BH1
1
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