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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
DNase-seq
18
ChIP-seq
Assay category
109
DNA accessibility
18
DNA binding
Target of assay
18
histone
18
histone modification
narrow histone mark
8
broad histone mark
7
control
3
RNA binding protein
3
transcription factor
Date released
707
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
202
February, 2023
200
May, 2022
178
August, 2021
168
July, 2018
148
October, 2019
127
June, 2019
97
July, 2019
88
November, 2018
82
May, 2019
78
December, 2017
65
October, 2018
59
March, 2020
59
September, 2020
58
September, 2018
57
November, 2019
49
April, 2018
42
April, 2019
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
127
bam
120
bed narrowPeak
120
bigBed narrowPeak
120
bigWig
109
bed bed3+
109
bed broadPeak
109
bigBed broadPeak
Organism
127
Homo sapiens
Biosample type
95
tissue
32
primary cell
Organ
kidney
39
musculature of body
33
heart
32
limb
30
brain
18
epithelium
18
ureter
14
connective tissue
7
vasculature
6
eye
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
127
AMP
Genome assembly (visualization)
120
GRCh38
104
hg19
Lab
127
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
target.investigated_as!
narrow histone mark
organ_slims!
kidney
BIOSAMPLE
ASSAY
127 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
muscle of leg
13
brain
12
heart left ventricle
3
+ See 25 more…
primary cell
cardiac fibroblast
3
3
mesenchymal stem cell
5
skeletal muscle satellite cell
5
cardiac muscle cell
1
2
retinal pigment epithelial cell
1
2
+ See 9 more…
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