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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
364
bam
322
fastq
218
bed narrowPeak
194
tsv
157
txt
153
zippedFastqFolder
150
bigWig
139
tagAlign
78
bigBed narrowPeak
64
xls
23
bed broadPeak
22
bed bed3+
22
bigBed broadPeak
15
bed bedMethyl
15
bigBed bedMethyl
8
csv
1
bedpe bed3+
1
hic
1
vcf
Organism
156
Homo sapiens
Biosample type
156
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
157
AMP
Genome assembly (visualization)
hg19
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_title!
CRISPR genome editing followed by sgRNA sequencing
assembly!
hg19
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
157 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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