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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
273
ChIP-seq
Assay category
273
DNA binding
Target of assay
581
histone modification
580
histone
307
narrow histone mark
273
broad histone mark
184
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
73
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
19
October, 2018
October, 2017
4
January, 2019
3
December, 2017
Available data
228
bed narrowPeak
228
bigWig
217
bam
199
bigBed narrowPeak
66
tagAlign
39
fastq
18
bed broadPeak
6
bed bed3+
Organism
269
Homo sapiens
Biosample type
273
tissue
122
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
60
brain
41
pancreas
37
heart
36
blood vessel
36
vasculature
34
limb
25
liver
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
4
spleen
Project
273
AMP
Genome assembly (visualization)
217
GRCh38
193
hg19
Lab
273
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
assay_title!
CRISPR genome editing followed by sgRNA sequencing
month_released!
October, 2017
BIOSAMPLE
ASSAY
273 results
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ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
islet of Langerhans
14
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