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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1742
ChIP-seq
1402
total RNA-seq
428
ATAC-seq
293
single cell RNA-seq
193
DNase-seq
86
RNA microarray
84
snATAC-seq
57
pCHi-C
28
WGBS
26
Hi-C
18
small RNA-seq
15
RRBS
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
2
August, 2021
1
May, 2021
Available data
2
bed bed3+
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Organ
2
connective tissue
epithelium
2
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
2
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
assay_title!
CRISPRi RNA-seq
organ_slims!
epithelium
BIOSAMPLE
ASSAY
3 results
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Capture-C
DNAme array
in vitro differentiated cells
adipocyte
1
osteoblast
1
primary cell
monocyte
1
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