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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ATAC-seq
17
total RNA-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
93
DNA accessibility
18
Transcription
Date released
571
February, 2021
352
August, 2017
271
August, 2021
250
October, 2019
193
May, 2020
172
May, 2021
163
June, 2019
120
July, 2018
115
May, 2019
111
February, 2023
94
December, 2017
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
52
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
39
February, 2018
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
November, 2020
1
August, 2018
1
August, 2022
1
March, 2023
Available data
65
bed narrowPeak
10
bed bed3
7
txt
4
bed bed3+
4
tsv
3
bed bedgraph
3
bigWig
Organism
111
Homo sapiens
Biosample type
95
tissue
primary cell
16
in vitro differentiated cells
cell line
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
18
pancreas
14
connective tissue
14
epithelium
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
93
AMP
18
T1D
Genome assembly (visualization)
45
hg19
35
GRCh38
Lab
90
AMP-T2D consortium
18
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
5
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
biosample_type!
cell line
primary cell
BIOSAMPLE
ASSAY
111 results
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Clear Filters
ATAC-seq
total RNA-seq
snATAC-seq
single cell RNA-seq
tissue
coronary artery
35
islet of Langerhans
11
5
2
retina
15
2
pigmented layer of retina
12
2
acetabular part of hip bone
1
1
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in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
2
adipocyte
1
1
preadipocyte
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
+ See 2 more…
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