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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
Assay category
5
3D chromatin structure
Date released
4
July, 2019
1
October, 2019
Available data
1814
bam
1779
bigWig
1599
tsv
501
fastq
492
bed narrowPeak
241
bigBed narrowPeak
220
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_title!
CRISPRi RNA-seq
ChIP-seq
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
5 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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