Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
single cell RNA-seq
5
Hi-C
3
total RNA-seq
1
FAIRE-seq
1
WGBS
pCHi-C
Assay category
DNA binding
9
Transcription
5
3D chromatin structure
1
DNA accessibility
1
DNA methylation
Date released
6
August, 2021
3
February, 2020
3
July, 2019
2
March, 2020
2
October, 2019
Available data
9
tsv
3
bigWig
3
hic
2
bam
2
bed bed3+
2
bedpe bed3+
2
hdf5
1
bed narrowPeak
1
bigBed narrowPeak
1
tar
Organism
16
Homo sapiens
Biosample type
11
tissue
5
primary cell
Organ
249
pancreas
198
epithelium
134
kidney
103
heart
92
bone element
65
liver
48
eye
35
connective tissue
20
brain
19
lung
17
vasculature
16
blood vessel
16
musculature of body
10
adipose tissue
9
blood
9
bodily fluid
8
skeleton
7
limb
4
artery
3
vein
1
embryo
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
16
AMP
Genome assembly (visualization)
GRCh38
83
hg19
Lab
16
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
CRISPRi RNA-seq
pCHi-C
assembly!
GRCh38
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
Hi-C
total RNA-seq
FAIRE-seq
WGBS
tissue
aorta
4
1
1
pulmonary artery
2
ascending aorta
1
coronary artery
1
tibial artery
1
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
Download