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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
259
ChIP-seq
Assay category
259
DNA binding
Target of assay
259
transcription factor
118
histone
118
histone modification
100
control
69
broad histone mark
66
recombinant protein
49
narrow histone mark
48
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
259
fastq
258
bam
255
bigWig
251
bed narrowPeak
251
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
259
Homo sapiens
Biosample type
241
cell line
15
tissue
3
primary cell
Organ
241
liver
10
pancreas
5
adipose tissue
5
connective tissue
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
259
AMP
Genome assembly (visualization)
253
hg19
219
GRCh38
Lab
259
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
assay_title!
CRISPRi RNA-seq
BIOSAMPLE
ASSAY
259 results
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Clear Filters
ChIP-seq
cell line
HepG2
241
tissue
body of pancreas
9
omental fat pad
3
subcutaneous adipose tissue
2
pancreas
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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