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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
70
DNA binding
9
DNA accessibility
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
301
August, 2017
252
October, 2019
218
June, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
79
November, 2018
74
October, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
1
November, 2020
Available data
79
bam
79
fastq
72
bed narrowPeak
72
bigBed narrowPeak
72
bigWig
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
Organism
79
Homo sapiens
Biosample type
60
cell line
19
tissue
Organ
52
liver
15
blood
15
bodily fluid
7
spleen
2
brain
2
pancreas
1
adipose tissue
1
connective tissue
Project
79
AMP
Genome assembly (visualization)
72
GRCh38
70
hg19
Lab
79
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
Capture-C
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
DNase-seq
cell line
HepG2
45
GM12878
15
tissue
spleen
6
1
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
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