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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
770
ChIP-seq
206
total RNA-seq
38
DNase-seq
27
ATAC-seq
7
Hi-C
7
small RNA-seq
5
WGBS
5
pCHi-C
4
RRBS
4
single cell RNA-seq
2
STARR-seq
1
FAIRE-seq
1
whole genome sequencing assay
Assay category
38
DNA accessibility
Date released
32
June, 2019
5
November, 2018
1
August, 2017
Available data
37
bam
37
bed bed3+
37
bed broadPeak
37
bed narrowPeak
37
bigBed broadPeak
37
bigBed narrowPeak
37
bigWig
5
fastq
Organism
38
Homo sapiens
Biosample type
31
tissue
7
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
38
AMP
Genome assembly (visualization)
37
GRCh38
27
hg19
Lab
38
AMP-T2D consortium
assay_title!
Capture-C
BIOSAMPLE
ASSAY
38 results
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DNase-seq
tissue
brain
14
frontal cortex
2
liver
2
right lobe of liver
2
Ammon's horn
1
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
+ See 2 more…
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